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Bug 3101 - implement support for the TMSi poly5 format

Status CLOSED FIXED
Reported 2016-03-29 16:51:00 +0200
Modified 2016-06-14 16:14:53 +0200
Product: FieldTrip
Component: fileio
Version: unspecified
Hardware: PC
Operating System: Mac OS
Importance: P5 normal
Assigned to: Robert Oostenveld
URL:
Tags:
Depends on:
Blocks:
See also:

Robert Oostenveld - 2016-03-29 16:51:47 +0200

Katharina (CC) has a reader for it.


Robert Oostenveld - 2016-03-29 17:02:17 +0200

data is organized in dirname/dirname.EEG.Poly5 dirname/dirname.EEG.csv (does not contain all events) dirname/Recors.xses (this is an XML file with header information) TODO - extend ft_filetype for the Poly5 extension and for the directory. - extend dataset2files - implement support in ft_read_header, data and event


Robert Oostenveld - 2016-03-29 17:10:38 +0200

@Katharina, please get the latest fieldtrip version according to the instructions at http://www.fieldtriptoolbox.org/development/git The "quickly access" is sufficient, no reason to fork on github.


Robert Oostenveld - 2016-03-31 14:44:10 +0200

I implemented support for the Poly5 format. mac011> git commit -a [bug3101-poly5 7feec29] ENH - implemented the TMSi poly5 file format. Some cleanups and reordering in the related functions. See http://bugzilla.fieldtriptoolbox.org/show_bug.cgi?id=3101 8 files changed, 861 insertions(+), 632 deletions(-) create mode 100644 fileio/private/read_tmsi_poly5.m mac011> git commit -a [bug3101-poly5 ed48242] DOC - documentation updates, see http://bugzilla.fieldtriptoolbox.org/show_bug.cgi?id=3101 3 files changed, 10 insertions(+), 11 deletions(-) It is not yet in the release version, let me first write an example analysis script that demonstrates it.


Robert Oostenveld - 2016-03-31 14:46:13 +0200

(In reply to Robert Oostenveld from comment #3) On https://github.com/fieldtrip/fieldtrip/pull/131 you can see the suggested code changes. I will report once it is in the FieldTrip release version.


Robert Oostenveld - 2016-03-31 18:11:15 +0200

I have made a elaborate test script, that all seems to work. I have added it to the release version. If you get the latest version from http://www.fieldtriptoolbox.org/development/git or the daily release version from the FTP this evening after ~22h, you will have the support. I will send the test script in a separate mail.


Robert Oostenveld - 2016-06-14 16:14:53 +0200

Hereby I am closing multiple bugs that have been resolved for some time now. If you don't agree to the resolution, please reopen.