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Bug 1876 - implement support for the PALS B12 atlas in ft_read_atlas

Status CLOSED WONTFIX
Reported 2012-12-06 23:04:00 +0100
Modified 2014-03-06 15:39:03 +0100
Product: FieldTrip
Component: fileio
Version: unspecified
Hardware: PC
Operating System: Mac OS
Importance: P3 normal
Assigned to: Jan-Mathijs Schoffelen
URL:
Tags:
Depends on:
Blocks:
See also:

Robert Oostenveld - 2012-12-06 23:04:22 +0100

this was brought up by Frederic in an email on the fieldtrip list. I think it should be relatively straight forward to implement a test script and proper support for this (as we already know how to deal with some Caret formats). The data is here http://sumsdb.wustl.edu/sums/directory.do?id=6585200&dir_name=CARET_TUTORIAL_SEPT-06 TODO in steps - download the data and copy to home/common - figure out which file to start with (there is a whole bunch) - write a test script that calls ft_read_atlas and/or ft_read_headshape - ensure that the output is consistent with the parcellation datatype Along the way: implement all the stuff that needs to be done (e.g. ft_filetype and ft_read_xxx).


Jan-Mathijs Schoffelen - 2014-01-29 15:41:51 +0100

Pals B12 has been 'replaced' by Conte69. Since the directory layout of the Pals B12 package is so messy, I suggest to leave this be. Conte69 can in principle be handled (but data itself is not released along with fieldtrip).